Publications
1.-
Contreras-Lopez O, Vidal EA, Riveras E, Alvarez JM, Moyano TC, Sparks EE, Medina J, Pasquino A, Benfey PN, Coruzzi GM, Gutiérrez RA (2022). Spatiotemporal analysis identifies ABF2 and ABF3 as key hubs of endodermal response to nitrate.
Proc Natl Acad Sci U S A 119.
PubMed
2.-
Di Genova A, Nardocci G, Maldonado-Agurto R, Hodar C, Valdivieso C, Morales P, Gajardo F, Marina R, Gutiérrez RA, Orellana A, Cambiazo V, Gonzalez M, Glavic A, Mendez MA, Maass A, Allende ML, Montecino MA (2022). Genome sequencing and transcriptomic analysis of the Andean killifish Orestias ascotanensis reveals adaptation to high-altitude aquatic life.
Genomics 114, 305-315.
PubMed
3.-
Eshel G, Araus V, Undurraga S, Soto DC, Moraga C, Montecinos A, Moyano T, Maldonado J, Diaz FP, Varala K, Nelson CW, Contreras-Lopez O, Pal-Gabor H, Kraiser T, Carrasco-Puga G, Nilo-Poyanco R, Zegar CM, Orellana A, Montecino M, Maass A, Allende ML, DeSalle R, Stevenson DW, Gonzalez M, Latorre C, Coruzzi GM, Gutiérrez RA (2021). Plant ecological genomics at the limits of life in the Atacama Desert.
Proc Natl Acad Sci U S A 118.
PubMed
4.-
Gonzalez-Martin A, Moyano T, Gutierrez DA, Carvajal FJ, Cerpa W, Hanley JG, Gutiérrez RA, Alvarez AR (2021). c-Abl regulates a synaptic plasticity-related transcriptional program involved in memory and learning.
Prog Neurobiol 205, 102122.
PubMed
5.-
Moyano TC, Gutiérrez RA, Alvarez JM (2021). Genomic Footprinting Analyses from DNase-seq Data to Construct Gene Regulatory Networks.
Methods Mol Biol 2328, 25-46.
PubMed
6.-
Vega A, Fredes I, O'Brien J, Shen Z, Otvos K, Abualia R, Benkova E, Briggs SP, Gutiérrez RA (2021). Nitrate triggered phosphoproteome changes and a PIN2 phosphosite modulating root system architecture.
EMBO Rep 22, e51813.
PubMed
7.-
Ruffel S, Chaput V, Przybyla-Toscano J, Fayos I, Ibarra C, Moyano T, Fizames C, Tillard P, O'Brien JA, Gutiérrez RA, Gojon A, Lejay L (2021). Genome-wide analysis in response to nitrogen and carbon identifies regulators for root AtNRT2 transporters.
Plant Physiol 186, 696-714.
PubMed
8.-
Carrasco-Puga G, Díaz FP, Soto DC, Hernández-Castro C, Contreras-López O, Maldonado A, Latorre C, Gutiérrez RA (2021). Revealing hidden plant diversity in arid environments
Ecography , 98-111.
PubMed
9.-
Herrera-Vasquez A, Fonseca A, Ugalde JM, Lamig L, Seguel A, Moyano TC, Gutiérrez RA, Salinas P, Vidal EA, Holuigue L (2021). TGA class II transcription factors are essential to restrict oxidative stress in response to UV-B stress in Arabidopsis.
J Exp Bot 72, 1891-1905.
PubMed
10.-
Otvos K, Marconi M, Vega A, O'Brien J, Johnson A, Abualia R, Antonielli L, Montesinos JC, Zhang Y, Tan S, Cuesta C, Artner C, Bouguyon E, Gojon A, Friml J, Gutiérrez RA, Wabnik K, Benkova E (2021). Modulation of plant root growth by nitrogen source-defined regulation of polar auxin transport.
EMBO J 40, e106862.
PubMed
11.-
Zuniga LM, Andrade JC, Fabrega-Gueren F, Orihuela PA, Velasquez EV, Vidal EA, Gutiérrez RA, Morales P, Gomez-Silva B, Croxatto HB (2021). Mating induces early transcriptional response in the rat endosalpinx: the role of TNF and RA.
Reproduction 161, 43-59.
PubMed
12.-
Dussarrat T, Decros G, Díaz FP, Gibon Y, Latorre C, Rolin D, Gutiérrez RA, Pétriacq P (2021). Another Tale from the Harsh World: How Plants Adapt to Extreme Environments
Annual Plant Reviews online. 7, 551-603.
PubMed
13.-
Guajardo L, Aguilar R, Bustos FJ, Nardocci G, Gutiérrez RA, van Zundert B, Montecino M (2020). Downregulation of the Polycomb-Associated Methyltransferase Ezh2 during Maturation of Hippocampal Neurons Is Mediated by MicroRNAs Let-7 and miR-124.
Int J Mol Sci 21.
PubMed
14.-
Wozniak A, Cerda A, Ibarra-Henriquez C, Sebastian V, Armijo G, Lamig L, Miranda C, Lagos M, Solari S, Guzman AM, Quiroga T, Hitschfeld S, Riveras E, Ferres M, Gutiérrez RA, Garcia P (2020). A simple RNA preparation method for SARS-CoV-2 detection by RT-qPCR.
Sci Rep 10, 16608.
PubMed
15.-
Vidal EA, Alvarez JM, Araus V, Riveras E, Brooks MD, Krouk G, Ruffel S, Lejay L, Crawford NM, Coruzzi GM, Gutiérrez RA, Vidal EA, Alvarez JM, Araus V, Riveras E, Brooks M, Krouk G, Ruffel S, Lejay L, Crawford N, Coruzzi GM, Gutiérrez RA (2020). Nitrate in 2020: Thirty Years from Transport to Signaling Networks.Nitrate 2020: Thirty years from transport to signaling networks.
Plant CellPlant Cell 32, 2094-2119.
PubMed
16.-
Swift J, Alvarez JM, Araus V, Gutiérrez RA, Coruzzi GM, Swift J, Alvarez JM, Araus V, Gutiérrez RA, Coruzzi GM (2020). Nutrient dose-responsive transcriptome changes driven by Michaelis-Menten kinetics underlie plant growth rates.Nutrient dose-responsive transcriptome changes driven by Michaelis-Menten kinetics underlie plant growth rates.
Proc Natl Acad Sci U S AProc Natl Acad Sci U S A 117117, 12531-1254012531-12540.
PubMed
17.-
Moreno S, Canales J, Hong L, Robinson D, Roeder AHK, Gutiérrez RA, Moreno S, Canales J, Hong L, Robinson D, Roeder AHK, Gutiérrez RA (2020). Nitrate Defines Shoot Size through Compensatory Roles for Endoreplication and Cell Division in Arabidopsis thaliana.Nitrate Defines Shoot Size through Compensatory Roles for Endoreplication and Cell Division in Arabidopsis thaliana.
Curr BiolCurr Biol 3030, 1988-2000.e31988-2000.e3.
PubMed
18.-
Riveras E, Azocar L, Moyano TC, Ocares M, Molina H, Romero D, Roa JC, Valbuena JR, Gutiérrez RA, Miquel JF (2020). Transcriptomic profiles reveal differences in zinc metabolism, inflammation, and tight junction proteins in duodenum from cholesterol gallstone subjects.
Sci Rep 10, 7448.
PubMed
19.-
Cruz N, Méndez T, Ramos P, Urbina D, Vega A, Gutiérrez RA, Moya-León MA, Herrera R (2019). Induction of PrMADS10 on the lower side of bent pine tree stems: potential role in modifying plant cell wall properties and wood anatomy.
Sci Rep 9, 18981.
PubMed
20.-
Naulin PA, Armijo GI, Vega AS, Tamayo KP, Gras DE, de la Cruz J, Gutiérrez RA (2020). Nitrate Induction of Primary Root Growth Requires Cytokinin Signaling in Arabidopsis thaliana.
Plant Cell Physiol 61, 342-352.
PubMed
21.-
Wood, J, Díaz, F, Latorre, C, Wilmshurst, J, Burge, O, González, F, Gutiérrez RA (2019). Ancient parasite DNA from late Quaternary Atacama Desert rodent middens.
Quat. Sci Rev 226, 106031.
22.-
Vega A, O'Brien JA, Gutiérrez RA (2019). Nitrate and hormonal signaling crosstalk for plant growth and development.
Curr Opin Plant Biol 52, 155-163.
PubMed
23.-
Alvarez JM, Moyano TC, Zhang T, Gras DE, Herrera FJ, Araus V, O'Brien JA, Carrillo L, Medina J, Vicente-Carbajosa J, Jiang J, Gutiérrez RA (2019). Local Changes in Chromatin Accessibility and Transcriptional Networks Underlying the Nitrate Response in Arabidopsis Roots.
Mol Plant 12, 1545-1560.
PubMed
24.-
Pérez-Palma E, Bustos BI, Lal D, Buch S, Azocar L, Toliat MR, Lieb W, Franke A, Hinz S, Burmeister G, von Shönfels W, Schafmayer C, Ahnert P, Völzke H, Völker U, Homuth G, Lerch MM, Puschel K, Gutiérrez RA, Hampe J, Nürnberg P, Miquel JF, De Ferrari GV (2020). Copy number variants in lipid metabolism genes are associated with gallstones disease in men.
Eur J Hum Genet 28, 264-273.
PubMed
25.-
Falter-Braun P, Brady S, Gutiérrez RA, Coruzzi GM, Krouk G (2019). iPlant Systems Biology (iPSB): An International Network Hub in the Plant Community.
Mol Plant 12, 727-730.
PubMed
26.-
Brooks MD, Cirrone J, Pasquino AV, Alvarez JM, Swift J, Mittal S, Juang CL, Varala K, Gutiérrez RA, Krouk G, Shasha D, Coruzzi GM (2019). Network Walking charts transcriptional dynamics of nitrogen signaling by integrating validated and predicted genome-wide interactions.
Nat Commun 10, 1569.
PubMed
27.-
Vidal EA, Moyano TC, Bustos BI, Perez-Palma E, Moraga C, Riveras E, Montecinos A, Azocar L, Soto DC, Vidal M, Di Genova A, Puschel K, Nurnberg P, Buch S, Hampe J, Allende ML, Cambiazo V, Gonzalez M, Hodar C, Montecino M, Munoz-Espinoza C, Orellana A, Reyes-Jara A, Travisany D, Vizoso P, Moraga M, Eyheramendy S, Maass A, De Ferrari GV, Miquel JF, Gutiérrez RA (2019). Whole Genome Sequence, Variant Discovery and Annotation in Mapuche-Huilliche Native South Americans.
Sci Rep 9, 2132.
PubMed
28.-
Salazar, M, Valenzuela, D, Tironi, M, Gutiérrez RA (2019). The ambivalent regulator: the construction of a regulatory style for genetically modified crops in Chile
Tapuya: Latin American Science, Technology and Society 2, 199-219.
PubMed
29.-
Diaz FP, Latorre C, Carrasco-Puga G, Wood JR, Wilmshurst JM, Soto DC, Cole TL, Gutiérrez RA (2019). Multiscale climate change impacts on plant diversity in the Atacama Desert.
Glob Chang Biol 25, 1733-1745.
PubMed
30.-
Fernandez-Gomez B, Maldonado J, Mandakovic D, Gaete A, Gutiérrez RA, Maass A, Cambiazo V, Gonzalez M (2019). Bacterial communities associated to Chilean altiplanic native plants from the Andean grasslands soils.
Sci Rep 9, 1042.
PubMed
31.-
Bustos BI, Perez-Palma E, Buch S, Azocar L, Riveras E, Ugarte GD, Toliat M, Nurnberg P, Lieb W, Franke A, Hinz S, Burmeister G, von Schonfels W, Schafmayer C, Volzke H, Volker U, Homuth G, Lerch MM, Santos JL, Puschel K, Bambs C, Roa JC, Gutiérrez RA, Hampe J, De Ferrari GV, Miquel JF (2019). Variants in ABCG8 and TRAF3 genes confer risk for gallstone disease in admixed Latinos with Mapuche Native American ancestry.
Sci Rep 9, 772.
PubMed
32.-
Pollak B, Cerda A, Delmans M, Alamos S, Moyano T, West A, Gutiérrez RA, Patron NJ, Federici F, Haseloff J (2019). Loop assembly: a simple and open system for recursive fabrication of DNA circuits.
New Phytol 222, 628-640.
PubMed
33.-
Fredes I, Moreno S, Diaz FP, Gutiérrez RA (2019). Nitrate signaling and the control of Arabidopsis growth and development.
Curr Opin Plant Biol 47, 112-118.
PubMed
34.-
Wood JR, Diaz FP, Latorre C, Wilmshurst JM, Burge OR, Gutiérrez RA (2018). Plant pathogen responses to Late Pleistocene and Holocene climate change in the central Atacama Desert, Chile.
Sci Rep 8, 17208.
PubMed
35.-
Mandakovic D, Rojas C, Maldonado J, Latorre M, Travisany D, Delage E, Bihouee A, Jean G, Diaz FP, Fernandez-Gomez B, Cabrera P, Gaete A, Latorre C, Gutiérrez RA, Maass A, Cambiazo V, Navarrete SA, Eveillard D, Gonzalez M (2018). Structure and co-occurrence patterns in microbial communities under acute environmental stress reveal ecological factors fostering resilience.
Sci Rep 8, 5875.
PubMed
36.-
Contreras-Lopez O, Moyano TC, Soto DC, Gutiérrez RA (2018). Step-by-Step Construction of Gene Co-expression Networks from High-Throughput Arabidopsis RNA Sequencing Data.
Methods Mol Biol 1761, 275-301.
PubMed
37.-
Gras DE, Vidal EA, Undurraga SF, Riveras E, Moreno S, Dominguez-Figueroa J, Alabadi D, Blazquez M, Medina J, Gutiérrez RA (2017). SMZ/SNZ and gibberellin signaling are required for nitrate-elicited delay of flowering time in Arabidopsis thaliana.
J Exp Bot .
PubMed
38.-
Canales J, Contreras-Lopez O, Alvarez JM, Gutiérrez RA (2017). Nitrate induction of root hair density is mediated by TGA1/TGA4 and CPC transcription factors in Arabidopsis thaliana.
Plant J 92, 305-316.
PubMed
39.-
Armijo G, Gutiérrez RA (2017). Emerging Players in the Nitrate Signaling Pathway.
Mol Plant 10, 1019-1022.
PubMed
40.-
Undurraga SF, Ibarra-Henriquez C, Fredes I, Alvarez JM, Gutiérrez RA (2017). Nitrate signaling and early responses in Arabidopsis roots.
J Exp Bot 68, 2541-2551.
PubMed
41.-
Friesner J, Assmann SM, Bastow R, Bailey-Serres J, Beynon J, Brendel V, Buell CR, Bucksch A, Busch W, Demura T, Dinneny JR, Doherty CJ, Eveland AL, Falter-Braun P, Gehan MA, Gonzales M, Grotewold E, Gutiérrez RA, Kramer U, Krouk G, Ma S, Markelz RJC, Megraw M, Meyers BC, Murray JAH, Provart NJ, Rhee S, Smith R, Spalding EP, Taylor C, Teal TK, Torii KU, Town C, Vaughn M, Vierstra R, Ware D, Wilkins O, Williams C, Brady SM (2017). The Next Generation of Training for Arabidopsis Researchers: Bioinformatics and Quantitative Biology.
Plant Physiol 175, 1499-1509.
PubMed
42.-
Yazaki J, Galli M, Kim AY, Nito K, Aleman F, Chang KN, Carvunis AR, Quan R, Nguyen H, Song L, Alvarez JM, Huang SS, Chen H, Ramachandran N, Altmann S, Gutiérrez RA, Hill DE, Schroeder JI, Chory J, LaBaer J, Vidal M, Braun P, Ecker JR (2016). Mapping transcription factor interactome networks using HaloTag protein arrays.
Proc Natl Acad Sci U S A 113, E4238-47.
PubMed
43.-
Puelma T, Araus V, Canales J, Vidal EA, Cabello JM, Soto A, Gutiérrez RA (2017). GENIUS: web server to predict local gene networks and key genes for biological functions.
Bioinformatics 33, 760-761.
PubMed
44.-
O'Brien JA, Vega A, Bouguyon E, Krouk G, Gojon A, Coruzzi G, Gutiérrez RA (2016). Nitrate Transport, Sensing, and Responses in Plants.
Mol Plant 9, 837-56.
PubMed
45.-
Araus V, Vidal EA, Puelma T, Alamos S, Mieulet D, Guiderdoni E, Gutiérrez RA (2016). Members of BTB Gene Family of Scaffold Proteins Suppress Nitrate Uptake and Nitrogen Use Efficiency.
Plant Physiol 171, 1523-32.
PubMed
46.-
Perez-Delgado CM, Moyano TC, Garcia-Calderon M, Canales J, Gutiérrez RA, Marquez AJ, Betti M (2016). Use of transcriptomics and co-expression networks to analyze the interconnections between nitrogen assimilation and photorespiratory metabolism.
J Exp Bot 67, 3095-108.
PubMed
47.-
Diaz FP, Frugone M, Gutiérrez RA, Latorre C (2016). Nitrogen cycling in an extreme hyperarid environment inferred from delta(15)N analyses of plants, soils and herbivore diet.
Sci Rep 6, 22226.
PubMed
48.-
Vega A, Canessa P, Hoppe G, Retamal I, Moyano TC, Canales J, Gutiérrez RA, Rubilar J (2015). Transcriptome analysis reveals regulatory networks underlying differential susceptibility to Botrytis cinerea in response to nitrogen availability in Solanum lycopersicum.
Front Plant Sci 6, 911.
PubMed
49.-
Riveras E, Alvarez JM, Vidal EA, Oses C, Vega A, Gutiérrez RA (2015). The Calcium Ion Is a Second Messenger in the Nitrate Signaling Pathway of Arabidopsis.
Plant Physiol 169, 1397-404.
PubMed
50.-
Vidal EA, Alvarez JM, Moyano TC, Gutiérrez RA (2015). Transcriptional networks in the nitrate response of Arabidopsis thaliana.
Curr Opin Plant Biol 27, 125-32.
PubMed
51.-
Acuna M, Martinez P, Moraga C, He X, Moraga M, Hunter B, Nuernberg P, Gutiérrez RA, Gonzalez M, Schuchman EH, Luis Santos J, Miquel JF, Mabe P, Zanlungo S (2015). Epidemiological, clinical and biochemical characterization of the p.(Ala359Asp) SMPD1 variant causing Niemann-Pick disease type B.
Eur J Hum Genet .
PubMed
52.-
Moyano TC, Vidal EA, Contreras-Lopez O, Gutiérrez RA (2015). Constructing simple biological networks for understanding complex high-throughput data in plants.
Methods Mol Biol 1284, 503-26.
PubMed
53.-
Vidal EA, Moyano TC, Canales J, Gutiérrez RA (2014). Nitrogen control of developmental phase transitions in Arabidopsis thaliana.
J Exp Bot .
PubMed
54.-
Alvarez JM, Riveras E, Vidal EA, Gras DE, Contreras-Lopez O, Tamayo KP, Aceituno F, Gomez I, Ruffel S, Lejay L, Jordana X, Gutiérrez RA (2014). Systems approach identifies TGA1 and TGA4 transcription factors as important regulatory components of the nitrate response of Arabidopsis thaliana roots.
Plant J .
PubMed
55.-
Vidal EA, Alvarez JM, Gutiérrez RA (2014). Nitrate regulation of AFB3 and NAC4 gene expression in Arabidopsis roots depends on NRT1.1 nitrate transport function.
Plant Signal Behav 9.
PubMed
56.-
Canales J, Moyano TC, Villarroel E, Gutiérrez RA (2014). Systems analysis of transcriptome data provides new hypotheses about Arabidopsis root response to nitrate treatments.
Front Plant Sci 5, 22.
PubMed
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57.-
Federici F, Rudge TJ, Pollak B, Haseloff J, Gutiérrez RA (2013). Synthetic Biology: opportunities for Chilean bioindustry and education.
Biol Res 46, 383-93.
PubMed
58.-
Vidal EA, Moyano TC, Riveras E, Contreras-Lopez O, Gutiérrez RA (2013). Systems approaches map regulatory networks downstream of the auxin receptor AFB3 in the nitrate response of Arabidopsis thaliana roots.
Proc Natl Acad Sci U S A 110, 12840-5.
PubMed
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59.-
Vidal EA, Moyano TC, Krouk G, Katari MS, Tanurdzic M, McCombie WR, Coruzzi GM, Gutiérrez RA (2013). Integrated RNA-seq and sRNA-seq analysis identifies novel nitrate-responsive genes in Arabidopsis thaliana roots.
BMC Genomics 14, 701.
PubMed
60.-
Zuniga A, Poupin MJ, Donoso R, Ledger T, Guiliani N, Gutiérrez RA, Gonzalez B (2013). Quorum sensing and indole-3-acetic acid degradation play a role in colonization and plant growth promotion of Arabidopsis thaliana by Burkholderia phytofirmans PsJN.
Mol Plant Microbe Interact 26, 546-53.
PubMed
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62.-
Gutiérrez RA (2012). Systems biology for enhanced plant nitrogen nutrition.
Science 336, 1673-5.
PubMed
[Reprint]
64.-
Fuentes D, Meneses M, Nunes-Nesi A, Araujo WL, Tapia R, Gomez I, Holuigue L, Gutiérrez RA, Fernie AR, Jordana X (2011). A deficiency in the flavoprotein of Arabidopsis mitochondrial complex II results in elevated photosynthesis and better growth in nitrogen-limiting conditions.
Plant Physiol 157, 1114-27.
PubMed
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66.-
Krouk G, Ruffel S, Gutiérrez RA, Gojon A, Crawford NM, Coruzzi GM, Lacombe B (2011). A framework integrating plant growth with hormones and nutrients.
Trends Plant Sci 16, 178-82.
PubMed
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68.-
International Arabidopsis Informatics Consortium (2010). An international bioinformatics infrastructure to underpin the Arabidopsis community.
Plant Cell 22, 2530-6.
PubMed
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70.-
McClung CR, Gutiérrez RA (2010). Network news: prime time for systems biology of the plant circadian clock.
Curr Opin Genet Dev .
PubMed
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72.-
Katari MS, Nowicki SD, Aceituno FF, Nero D, Kelfer J, Thompson LP, Cabello JM, Davidson RS, Goldberg AP, Shasha DE, Coruzzi GM, Gutiérrez RA (2010). VirtualPlant: a software platform to support systems biology research.
Plant Physiol 152, 500-15.
PubMed
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73.-
Das M, Reichman JR, Haberer G, Welzl G, Aceituno FF, Mader MT, Watrud LS, Pfleeger TG, Gutiérrez RA, Schaffner AR, Olszyk DM (2010). A composite transcriptional signature differentiates responses towards closely related herbicides in Arabidopsis thaliana and Brassica napus.
Plant Mol Biol 72, 545-56.
PubMed
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74.-
Krouk G, Tranchina D, Lejay L, Cruikshank AA, Shasha D, Coruzzi GM, Gutiérrez RA (2009). A systems approach uncovers restrictions for signal interactions regulating genome-wide responses to nutritional cues in Arabidopsis.
PLoS Comput Biol 5, e1000326.
PubMed
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75.-
Reforgiato D, Gutiérrez RA, Shasha D (2008). GraphClust: A Method for Clustering Database of Graphs.
J Information & Knowledge Management. 7, 231-241.
76.-
Bender J, Benfey P, Bergmann D, Borevitz J, Coruzzi G, Dangl J, Dean C, Ecker J, Estelle M, Glazebrook J, Grant S, Guerinot ML, Gutierrez R, Long J, Nordborg M, Poethig S, Raikhel N, Schmitt J, Schnittger A, Vidal M (2008). 2020 vision for biology: the role of plants in addressing grand challenges in biology.
Mol Plant 1, 561-3.
PubMed
77.-
Aceituno FF, Moseyko N, Rhee SY, Gutiérrez RA (2008). The rules of gene expression in plants: Organ identity and gene body methylation are key factors for regulation of gene expression in Arabidopsis thaliana.
BMC Genomics 9, 438.
PubMed
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[Supplemental Material]
78.-
Holuigue L, Vielle-Calzada JP, Gutiérrez RA (2008). Crops in all shapes and sizes.
Genome Biol 9, 319.
PubMed
80.-
Thum KE, Shin MJ, Gutiérrez RA, Mukherjee I, Katari MS, Nero D, Shasha D, Coruzzi GM (2008). An integrated genetic, genomic and systems approach defines gene networks regulated by the interaction of light and carbon signaling pathways in Arabidopsis.
BMC Syst Biol 2, 31.
PubMed
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81.-
Gutiérrez RA, Stokes TL, Thum K, Xu X, Obertello M, Katari MS, Tanurdzic M, Dean A, Nero DC, McClung CR, Coruzzi GM (2008). Systems approach identifies an organic nitrogen-responsive gene network that is regulated by the master clock control gene CCA1.
Proc Natl Acad Sci U S A 105, 4939-44.
PubMed
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82.-
Gifford ML, Dean A, Gutiérrez RA, Coruzzi GM, Birnbaum KD (2008). Cell-specific nitrogen responses mediate developmental plasticity.
Proc Natl Acad Sci U S A 105, 803-8.
PubMed
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84.-
Gutiérrez RA, Lejay LV, Dean A, Chiaromonte F, Shasha DE, Coruzzi GM (2007). Qualitative network models and genome-wide expression data define carbon/nitrogen-responsive molecular machines in Arabidopsis.
Genome Biol 8, R7.
PubMed
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86.-
Li C, Potuschak T, Colon-Carmona A, Gutiérrez RA, Doerner P (2005). Arabidopsis TCP20 links regulation of growth and cell division control pathways.
Proc Natl Acad Sci U S A 102, 12978-83.
PubMed
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88.-
Gutiérrez RA, Shasha DE, Coruzzi GM (2005). Systems biology for the virtual plant.
Plant Physiol 138, 550-4.
PubMed
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90.-
Gutiérrez RA*, Larson MD, Wilkerson C (2004). The plant-specific database. Classification of Arabidopsis proteins based on their phylogenetic profile. *Corresponding author.
Plant Physiol 135, 1888-92.
PubMed
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92.-
Gutiérrez RA, Ewing RM, Cherry JM, Green PJ (2002). Identification of unstable transcripts in Arabidopsis by cDNA microarray analysis: rapid decay is associated with a group of touch- and specific clock-controlled genes.
Proc Natl Acad Sci U S A 99, 11513-8.
PubMed
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94.-
Gutiérrez RA, MacIntosh GC, Green PJ (1999). Current perspectives on mRNA stability in plants: multiple levels and mechanisms of control.
Trends Plant Sci 4, 429-438.
PubMed
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96.-
Gutierrez R, Cederlund E, Hjelmqvist L, Peirano A, Herrera F, Ghosh D, Duax W, Jornvall H, Eyzaguirre J (1998). Acetyl xylan esterase II from Penicillium purpurogenum is similar to an esterase from Trichoderma reesei but lacks a cellulose binding domain.
FEBS Lett 423, 35-8.
PubMed
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97.-
Egana L, Gutierrez R, Caputo V, Peirano A, Steiner J, Eyzaguirre J (1996). Purification and characterization of two acetyl xylan esterases from Penicillium purpurogenum.
Biotechnol Appl Biochem 24 ( Pt 1), 33-9.
PubMed
